CreatePredAlphaCost pred_alpha2k alpha11 T0346.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0346.t04.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha06 alpha11 T0346.t06.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 15 near_backbone 5 way_back 5 dry5 15 dry6.5 20 dry8 15 dry12 5 \ phobic_fit 2 \ sidechain 8 \ n_ca_c 5 bad_peptide 10 \ bystroff 5 \ soft_clashes 60 backbone_clashes 2 \ break 200 \ pred_alpha2k 2 \ pred_alpha04 3 \ pred_alpha06 4 \ constraints 10 \ hbond_geom 5 \ hbond_geom_backbone 10 \ hbond_geom_beta 50 \ hbond_geom_beta_pair 100 \ missing_atoms 1 \ maybe_metal 0.5 #from decoys/try1-opt2.sheets SheetConstraint P2 E9 L22 V15 hbond C4 1 SheetConstraint Q3 D7 L171 D167 hbond H5 1 SheetConstraint D7 N11 I166 D162 hbond E9 1 SheetConstraint I8 I10 V15 E13 hbond I10 1 SheetConstraint I18 M19 G141 S140 hbond M19 1 SheetConstraint M19 F23 I139 F135 hbond Q21 1 SheetConstraint R61 V63 Q69 M67 hbond R61 1 SheetConstraint F66 G71 T122 Q117 hbond I68 1 SheetConstraint Y88 F89 G115 N114 hbond F89 1 SheetConstraint F102 L104 V138 G136 hbond L104 1 SheetConstraint F102 A107 T122 Q117 hbond S105 1