Best Alignments for T0345

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f8aA/T0345-2f8aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f8aA/T0345-2f8aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9610e-311.59e-119
1xzoA/T0345-1xzoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xzoA/T0345-1xzoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4841e-134.07e-57
1st9A/T0345-1st9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1st9A/T0345-1st9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6127e-111.81e-50 c.47.1.10
2f9sA/T0345-2f9sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f9sA/T0345-2f9sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5366e-113.72e-48
2cvbA/T0345-2cvbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cvbA/T0345-2cvbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7713e-083.78e-41
2b7kA/T0345-2b7kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b7kA/T0345-2b7kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1559e-061.06e-41
1xvwA/T0345-1xvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xvwA/T0345-1xvwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9845e-064.84e-36
1z5yE/T0345-1z5yE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5yE/T0345-1z5yE-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8786e-068.27e-29
1zzoA/T0345-1zzoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zzoA/T0345-1zzoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0936e-051.12e-35
2fy6A/T0345-2fy6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fy6A/T0345-2fy6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3915e-052.97e-31

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001