Best Alignments for T0344

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nxmA/T0344-1nxmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nxmA/T0344-1nxmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9803e-011.42e+02 b.82.1.1
1tqzA/T0344-1tqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tqzA/T0344-1tqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0054e+001.94e-02
1ak2/T0344-1ak2-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ak2/T0344-1ak2-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2500e+001.29e+03 1zin c.37.1.1
g.41.2.1
1ps2/T0344-1ps2-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ps2/T0344-1ps2-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6900e+002.80e+01 2pspA g.16.1.1
1wwrA/T0344-1wwrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwrA/T0344-1wwrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8470e+004.57e+00
1eo1A/T0344-1eo1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eo1A/T0344-1eo1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5371e+002.50e-02 1eo1A c.55.5.1
1f9zA/T0344-1f9zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f9zA/T0344-1f9zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0752e+018.53e-01 1qipA d.32.1.1
1q8bA/T0344-1q8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q8bA/T0344-1q8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1320e+013.24e-01 d.58.4.6
2c9yA/T0344-2c9yA-t06-local-adpstyle1.a2m 2c9yA/T0344-2c9yA-t06-local-adpstyle1.al 1.2506e+012.47e+01
2al1A/T0344-2al1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al1A/T0344-2al1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2609e+016.63e-01

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001