Best Alignments for T0344

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1z47A/T0344-1z47A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z47A/T0344-1z47A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5662e-012.25e-09
1l2tA/T0344-1l2tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l2tA/T0344-1l2tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9506e-012.17e-10 c.37.1.12
1fobA/T0344-1fobA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fobA/T0344-1fobA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0388e+001.54e-04 c.1.8.3
2b99A/T0344-2b99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b99A/T0344-2b99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7411e+001.86e-04
1h61A/T0344-1h61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h61A/T0344-1h61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9946e+001.66e-05 1oyc c.1.4.1
1gv4A/T0344-1gv4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gv4A/T0344-1gv4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2370e+002.55e-12 c.3.1.5
c.3.1.5
d.87.1.1
1m5tA/T0344-1m5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m5tA/T0344-1m5tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5571e+003.08e-04 c.23.1.1
1c9kA/T0344-1c9kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c9kA/T0344-1c9kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9921e+002.27e-07 1c9kB c.37.1.11
2abbA/T0344-2abbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2abbA/T0344-2abbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5243e+001.77e-05
2anuA/T0344-2anuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2anuA/T0344-2anuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7806e+001.38e-12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001