Best Alignments for T0344

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nxmA/T0344-1nxmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nxmA/T0344-1nxmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2682e-019.76e+01 b.82.1.1
2awaA/T0344-2awaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2awaA/T0344-2awaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6649e+002.98e-01
2c9yA/T0344-2c9yA-t06-local-adpstyle1.a2m 2c9yA/T0344-2c9yA-t06-local-adpstyle1.al 7.9954e+002.47e+01
1wwrA/T0344-1wwrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwrA/T0344-1wwrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6022e+006.80e-01
1tqzA/T0344-1tqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tqzA/T0344-1tqzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7308e+001.94e-02
1eo1A/T0344-1eo1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eo1A/T0344-1eo1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1308e+012.37e-03 1eo1A c.55.5.1
1qipA/T0344-1qipA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qipA/T0344-1qipA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1910e+013.13e-01 1qipA d.32.1.1
2al1A/T0344-2al1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al1A/T0344-2al1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4341e+016.63e-01
1lxdA/T0344-1lxdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lxdA/T0344-1lxdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4407e+018.92e-01 1lfdA d.15.1.5
1q8bA/T0344-1q8bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q8bA/T0344-1q8bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5562e+012.72e-01 d.58.4.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001