Best Alignments for T0344

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1nxmA/T0344-1nxmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nxmA/T0344-1nxmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7678e-013.55e+02 b.82.1.1
2awaA/T0344-2awaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2awaA/T0344-2awaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0685e+001.75e+01
1wwrA/T0344-1wwrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwrA/T0344-1wwrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6011e+006.80e-01
1tqzA/T0344-1tqzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tqzA/T0344-1tqzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2909e+011.43e+00
1eo1A/T0344-1eo1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eo1A/T0344-1eo1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3436e+012.37e-03 1eo1A c.55.5.1
1lxdA/T0344-1lxdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lxdA/T0344-1lxdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3590e+018.68e+00 1lfdA d.15.1.5
1f9zA/T0344-1f9zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f9zA/T0344-1f9zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3712e+015.62e-01 1qipA d.32.1.1
2al1A/T0344-2al1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al1A/T0344-2al1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6647e+011.19e+00
4enl/T0344-4enl-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 4enl/T0344-4enl-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7070e+011.20e-01 4enl c.1.11.1
d.54.1.1
2al2A/T0344-2al2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al2A/T0344-2al2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8615e+011.68e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001