Best Alignments for T0342

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2g0qA/T0342-2g0qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g0qA/T0342-2g0qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5953e-129.26e-61
1vkbA/T0342-1vkbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vkbA/T0342-1vkbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3682e-115.46e-50 d.269.1.1
1v30A/T0342-1v30A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v30A/T0342-1v30A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5579e-071.31e-36
1xhsA/T0342-1xhsA-t06-global-adpstyle1.a2m 1xhsA/T0342-1xhsA-t06-global-adpstyle1.al 1.0346e+007.10e-22
1eejA/T0342-1eejA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eejA/T0342-1eejA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1490e+001.65e-02 1eejA c.47.1.9
d.17.3.1
1cjxA/T0342-1cjxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cjxA/T0342-1cjxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5557e+009.91e-08 1cjxA d.32.1.3
d.32.1.3
2bzlA/T0342-2bzlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bzlA/T0342-2bzlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6175e+006.27e-17
1t5hX/T0342-1t5hX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t5hX/T0342-1t5hX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7035e+005.44e-09 e.23.1.1
2fh7A/T0342-2fh7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fh7A/T0342-2fh7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1455e+008.60e-14
1g4wR/T0342-1g4wR-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g4wR/T0342-1g4wR-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9625e+002.80e-15 1g4uS a.24.11.1
c.45.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001