Best Alignments for T0342

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1z6nA/T0342-1z6nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z6nA/T0342-1z6nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8170e-016.21e-02
2d1eA/T0342-2d1eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d1eA/T0342-2d1eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1638e+001.06e-05
1utg/T0342-1utg-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1utg/T0342-1utg-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5798e+009.44e-02 1utg a.101.1.1
2tct/T0342-2tct-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2tct/T0342-2tct-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0611e+005.51e-03 2tct a.4.1.9
a.121.1.1
1w9gA/T0342-1w9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9gA/T0342-1w9gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6860e+003.18e-05
1uekA/T0342-1uekA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uekA/T0342-1uekA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7450e+004.22e-03 d.14.1.5
d.58.26.5
1pmzA/T0342-1pmzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pmzA/T0342-1pmzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1096e+006.28e-04 a.39.1.10
2f9fA/T0342-2f9fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f9fA/T0342-2f9fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3161e+005.62e-04
2f6hX/T0342-2f6hX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f6hX/T0342-2f6hX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3421e+001.79e+00
1qjtA/T0342-1qjtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qjtA/T0342-1qjtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4296e+001.88e-04 1eh2 a.39.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001