# TARGET T0342
# Using neural net t04-2621-IDGaaH13-3-13-7-13-9-13-11-ebghtl-stride-seeded.net
# This is a 4-layer network, with 
#	window	units
#	    3	   13
#	    7	   13
#	    9	   13
#	   11	    6 (1 EBGHTL )
# The input amino acid frequencies were determined from
# alignment T0342.t04-thin90.a2m.gz
# with weighted counts, using HenikoffWeight(1.3 bits/column, 1)
# The weighting was determined by the posterior distribution
# after regularizing with /projects/compbio/lib/recode3.20comp.
# Counts were regularized to probabilities using
# /projects/compbio/lib/recode3.20comp
# Total sequence weight for alignment was 3.73689
#
Pos	AA	E	B	G	H	T	C
10N	1S	5N	5N	5N	5N	5N	5N
1	K	0.064	0.003	0.001	0.005	0.100	0.827
2	K	0.555	0.007	0.002	0.009	0.077	0.350
3	I	0.918	0.003	0.001	0.003	0.017	0.057
4	I	0.976	0.002	0.001	0.005	0.005	0.012
5	C	0.951	0.002	0.001	0.011	0.011	0.025
6	M	0.791	0.003	0.002	0.032	0.041	0.130
7	G	0.383	0.007	0.015	0.047	0.140	0.408
8	A	0.151	0.011	0.189	0.158	0.263	0.227
9	K	0.099	0.017	0.388	0.135	0.275	0.085
10	E	0.101	0.012	0.402	0.133	0.285	0.068
11	N	0.042	0.015	0.081	0.215	0.427	0.220
12	G	0.031	0.012	0.017	0.042	0.292	0.606
13	L	0.018	0.014	0.003	0.038	0.142	0.785
14	P	0.008	0.008	0.006	0.220	0.119	0.640
15	L	0.001	0.001	0.034	0.909	0.029	0.026
16	E	0.004	0.001	0.027	0.927	0.025	0.016
17	Y	0.006	0.001	0.031	0.922	0.026	0.014
18	Q	0.009	0.002	0.015	0.942	0.020	0.012
19	E	0.006	0.001	0.018	0.931	0.032	0.012
20	K	0.005	0.001	0.025	0.922	0.027	0.020
21	L	0.005	0.002	0.035	0.918	0.026	0.015
22	K	0.009	0.002	0.054	0.840	0.043	0.052
23	A	0.020	0.005	0.061	0.402	0.135	0.376
24	I	0.079	0.036	0.021	0.094	0.215	0.554
25	E	0.100	0.027	0.012	0.024	0.430	0.406
26	P	0.037	0.019	0.038	0.025	0.586	0.294
27	N	0.027	0.010	0.050	0.017	0.725	0.171
28	D	0.069	0.034	0.089	0.023	0.651	0.135
29	Y	0.084	0.038	0.046	0.026	0.500	0.305
30	T	0.123	0.038	0.045	0.023	0.475	0.296
31	G	0.110	0.018	0.022	0.009	0.339	0.502
32	K	0.108	0.077	0.018	0.012	0.189	0.595
33	V	0.042	0.035	0.005	0.010	0.174	0.734
34	S	0.011	0.006	0.003	0.047	0.174	0.759
35	E	0.001	0.001	0.033	0.943	0.018	0.006
36	E	0.001	0.001	0.044	0.934	0.016	0.005
37	I	0.001	0.001	0.029	0.958	0.009	0.003
38	E	0.002	0.001	0.010	0.971	0.008	0.008
39	D	0.002	0.001	0.008	0.978	0.007	0.005
40	I	0.001	0.001	0.008	0.975	0.010	0.005
41	I	0.002	0.001	0.004	0.979	0.009	0.005
42	K	0.002	0.001	0.004	0.967	0.019	0.008
43	K	0.002	0.001	0.007	0.869	0.060	0.061
44	G	0.003	0.003	0.011	0.251	0.202	0.530
45	E	0.012	0.006	0.073	0.113	0.397	0.398
46	T	0.055	0.012	0.079	0.111	0.250	0.493
47	Q	0.044	0.014	0.057	0.146	0.154	0.585
48	T	0.022	0.012	0.006	0.049	0.056	0.856
49	L	0.008	0.002	0.001	0.003	0.017	0.969