Best Alignments for T0341

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wviA/T0341-1wviA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wviA/T0341-1wviA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2699e-221.18e-113
1vjrA/T0341-1vjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjrA/T0341-1vjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9499e-228.64e-114 c.108.1.14
1zjjA/T0341-1zjjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjjA/T0341-1zjjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6304e-224.91e-104
1jud/T0341-1jud-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0341-1jud-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9300e-214.52e-91 1qq5A c.108.1.1
2c4nA/T0341-2c4nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c4nA/T0341-2c4nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2168e-211.11e-111
1x42A/T0341-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0341-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4867e-187.74e-97
2gfhA/T0341-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0341-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3957e-183.76e-96
2ah5A/T0341-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0341-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2196e-175.66e-86
2fdrA/T0341-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0341-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9624e-173.00e-87
1o08A/T0341-1o08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o08A/T0341-1o08A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9915e-176.30e-83 c.108.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001