Best Alignments for T0338

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cchB/T0338-2cchB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cchB/T0338-2cchB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6955e-303.30e-98
1w98B/T0338-1w98B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w98B/T0338-1w98B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0575e-239.62e-82
1vin/T0338-1vin-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vin/T0338-1vin-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0472e-201.81e-96 1vin a.74.1.1
a.74.1.1
1kxu/T0338-1kxu-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kxu/T0338-1kxu-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5177e-163.63e-86 1jkw a.74.1.1
a.74.1.1
1f5qB/T0338-1f5qB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f5qB/T0338-1f5qB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3633e-161.59e-69 1f5qB a.74.1.1
a.74.1.1
1aisB/T0338-1aisB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aisB/T0338-1aisB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3194e-154.62e-67 1aisB a.74.1.2
a.74.1.2
1bu2A/T0338-1bu2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bu2A/T0338-1bu2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3410e-071.27e-82 1bu2A a.74.1.1
a.74.1.1
1c9bA/T0338-1c9bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c9bA/T0338-1c9bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2609e-071.72e-67 1tfb a.74.1.2
a.74.1.2
2g9xB/T0338-2g9xB-t06-global-adpstyle1.a2m 2g9xB/T0338-2g9xB-t06-global-adpstyle1.al 2.7159e-043.11e-71
2c5nB/T0338-2c5nB-t06-global-adpstyle1.a2m 2c5nB/T0338-2c5nB-t06-global-adpstyle1.al 3.1094e-043.11e-71

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001