# converted from rr file by 'rr2constraints.py' # Fri Dec 7 23:38:55 2007 # parameters: # nonbonus: 0.010000*sequencelen # topfraction: 0.750000*sequencelen # Constraint E130.CB F139.CB -100. 7.0 9.0 0.508121 Constraint V127.CB F139.CB -100. 7.0 9.0 0.204178 Constraint E130.CB I141.CB -100. 7.0 9.0 0.192726 bonus Constraint A35.CB L45.CB -100. 7.0 9.0 0.181068 bonus Constraint G42.CA I52.CB -100. 7.0 9.0 0.178168 bonus Constraint V127.CB I141.CB -100. 7.0 9.0 0.174483 bonus Constraint Y63.CB I75.CB -100. 7.0 9.0 0.166355 bonus Constraint H60.CB I75.CB -100. 7.0 9.0 0.164154 bonus Constraint A35.CB I56.CB -100. 7.0 9.0 0.162973 bonus Constraint T54.CB Y63.CB -100. 7.0 9.0 0.152353 bonus Constraint I38.CB I52.CB -100. 7.0 9.0 0.150757 bonus Constraint T154.CB L163.CB -100. 7.0 9.0 0.147267 bonus Constraint T154.CB M170.CB -100. 7.0 9.0 0.142003 bonus Constraint Q39.CB I52.CB -100. 7.0 9.0 0.140118 bonus Constraint I56.CB I75.CB -100. 7.0 9.0 0.136228 bonus Constraint Y63.CB K73.CB -100. 7.0 9.0 0.136274 bonus Constraint A80.CB M133.CB -100. 7.0 9.0 0.133819 bonus Constraint M41.CB S78.CB -100. 7.0 9.0 0.132064 bonus Constraint S174.CB V192.CB -100. 7.0 9.0 0.130934 bonus Constraint L37.CB S77.CB -100. 7.0 9.0 0.129061 bonus Constraint Q39.CB T54.CB -100. 7.0 9.0 0.124233 bonus Constraint G42.CA T54.CB -100. 7.0 9.0 0.122663 bonus Constraint K86.CB E130.CB -100. 7.0 9.0 0.119567 bonus Constraint C191.CB L227.CB -100. 7.0 9.0 0.118636 bonus Constraint E130.CB V150.CB -100. 7.0 9.0 0.114727 bonus Constraint T54.CB I75.CB -100. 7.0 9.0 0.110221 bonus Constraint Y63.CB S77.CB -100. 7.0 9.0 0.110432 bonus Constraint A171.CB C191.CB -100. 7.0 9.0 0.109177 bonus Constraint L37.CB I75.CB -100. 7.0 9.0 0.106033 bonus Constraint Y63.CB N74.CB -100. 7.0 9.0 0.104523 bonus Constraint L37.CB T54.CB -100. 7.0 9.0 0.103414 bonus Constraint N53.CB I75.CB -100. 7.0 9.0 0.102800 bonus Constraint S77.CB V97.CB -100. 7.0 9.0 0.103413 bonus Constraint T79.CB V97.CB -100. 7.0 9.0 0.102302 bonus Constraint I76.CB V97.CB -100. 7.0 9.0 0.100180 bonus Constraint L45.CB T54.CB -100. 7.0 9.0 0.098536 bonus Constraint I52.CB I75.CB -100. 7.0 9.0 0.099143 bonus Constraint M59.CB I75.CB -100. 7.0 9.0 0.098482 bonus Constraint I76.CB M133.CB -100. 7.0 9.0 0.099128 bonus Constraint I38.CB T54.CB -100. 7.0 9.0 0.098073 bonus Constraint V87.CB L137.CB -100. 7.0 9.0 0.099035 bonus Constraint A35.CB T54.CB -100. 7.0 9.0 0.097060 bonus Constraint S78.CB V97.CB -100. 7.0 9.0 0.096868 bonus Constraint A171.CB I189.CB -100. 7.0 9.0 0.097513 bonus Constraint A55.CB I76.CB -100. 7.0 9.0 0.094494 bonus Constraint I38.CB A55.CB -100. 7.0 9.0 0.093258 bonus Constraint A84.CB V97.CB -100. 7.0 9.0 0.092776 bonus Constraint M170.CB L196.CB -100. 7.0 9.0 0.091850 bonus Constraint L37.CB Y63.CB -100. 7.0 9.0 0.090735 bonus Constraint V127.CB L137.CB -100. 7.0 9.0 0.090240 bonus Constraint V157.CB N173.CB -100. 7.0 9.0 0.090588 bonus Constraint M64.CB I75.CB -100. 7.0 9.0 0.088517 bonus Constraint S167.CB I194.CB -100. 7.0 9.0 0.088345 bonus Constraint S174.CB C191.CB -100. 7.0 9.0 0.088856 bonus Constraint A34.CB S77.CB -100. 7.0 9.0 0.086801 bonus Constraint L83.CB V97.CB -100. 7.0 9.0 0.087236 bonus Constraint P186.CB A197.CB -100. 7.0 9.0 0.087646 bonus Constraint L37.CB H60.CB -100. 7.0 9.0 0.085943 bonus Constraint M41.CB T54.CB -100. 7.0 9.0 0.084888 bonus Constraint T54.CB S77.CB -100. 7.0 9.0 0.085319 bonus Constraint H60.CB F82.CB -100. 7.0 9.0 0.085885 bonus Constraint M41.CB Y58.CB -100. 7.0 9.0 0.084079 bonus Constraint H60.CB N74.CB -100. 7.0 9.0 0.084835 bonus Constraint H60.CB S77.CB -100. 7.0 9.0 0.084154 bonus Constraint Q39.CB Y63.CB -100. 7.0 9.0 0.083073 bonus Constraint I75.CB L129.CB -100. 7.0 9.0 0.083818 bonus Constraint S167.CB A190.CB -100. 7.0 9.0 0.083790 bonus Constraint A197.CB F234.CB -100. 7.0 9.0 0.083779 bonus Constraint Q39.CB I75.CB -100. 7.0 9.0 0.082762 bonus Constraint S167.CB I189.CB -100. 7.0 9.0 0.082515 bonus Constraint R31.CB M41.CB -100. 7.0 9.0 0.080275 bonus Constraint A34.CB T54.CB -100. 7.0 9.0 0.080901 bonus Constraint S167.CB A197.CB -100. 7.0 9.0 0.081461 bonus Constraint A34.CB L45.CB -100. 7.0 9.0 0.078908 bonus Constraint I38.CB Y58.CB -100. 7.0 9.0 0.078208 bonus Constraint I52.CB I76.CB -100. 7.0 9.0 0.079131 bonus Constraint A55.CB S77.CB -100. 7.0 9.0 0.079042 bonus Constraint I56.CB S77.CB -100. 7.0 9.0 0.078747 bonus Constraint A80.CB V97.CB -100. 7.0 9.0 0.078167 bonus Constraint L83.CB M133.CB -100. 7.0 9.0 0.078807 bonus Constraint A190.CB F234.CB -100. 7.0 9.0 0.078458 bonus Constraint L196.CB L230.CB -100. 7.0 9.0 0.079177 bonus Constraint G42.CA N53.CB -100. 7.0 9.0 0.076495 bonus Constraint T51.CB I76.CB -100. 7.0 9.0 0.076720 bonus Constraint I52.CB S77.CB -100. 7.0 9.0 0.076696 bonus Constraint L129.CB F139.CB -100. 7.0 9.0 0.076986 bonus Constraint L175.CB T187.CB -100. 7.0 9.0 0.077366 bonus Constraint L196.CB F234.CB -100. 7.0 9.0 0.076839 bonus Constraint A35.CB Y63.CB -100. 7.0 9.0 0.074447 bonus Constraint A35.CB H60.CB -100. 7.0 9.0 0.073081 bonus Constraint I38.CB T51.CB -100. 7.0 9.0 0.073978 bonus Constraint G42.CA T51.CB -100. 7.0 9.0 0.074722 bonus Constraint L175.CB V188.CB -100. 7.0 9.0 0.075708 bonus Constraint C193.CB F234.CB -100. 7.0 9.0 0.074699 bonus Constraint M41.CB F82.CB -100. 7.0 9.0 0.073659 bonus Constraint I52.CB Y63.CB -100. 7.0 9.0 0.073184 bonus Constraint V127.CB T136.CB -100. 7.0 9.0 0.072844 bonus Constraint T154.CB S167.CB -100. 7.0 9.0 0.073206 bonus Constraint I194.CB F234.CB -100. 7.0 9.0 0.073655 bonus Constraint A55.CB T79.CB -100. 7.0 9.0 0.072484 bonus Constraint A55.CB A84.CB -100. 7.0 9.0 0.071948 bonus Constraint I56.CB L83.CB -100. 7.0 9.0 0.072378 bonus Constraint L129.CB D149.CB -100. 7.0 9.0 0.071922 bonus Constraint S167.CB C193.CB -100. 7.0 9.0 0.072040 bonus Constraint V192.CB F234.CB -100. 7.0 9.0 0.072495 bonus Constraint I194.CB L227.CB -100. 7.0 9.0 0.071881 bonus Constraint R31.CB H60.CB -100. 7.0 9.0 0.070083 bonus Constraint L37.CB N74.CB -100. 7.0 9.0 0.070812 bonus Constraint M41.CB I56.CB -100. 7.0 9.0 0.070128 bonus Constraint A55.CB A80.CB -100. 7.0 9.0 0.070211 bonus Constraint A55.CB L83.CB -100. 7.0 9.0 0.070292 bonus Constraint L126.CB I141.CB -100. 7.0 9.0 0.070168 bonus Constraint L134.CB L163.CB -100. 7.0 9.0 0.069331 bonus Constraint T154.CB S174.CB -100. 7.0 9.0 0.069929 bonus Constraint M41.CB T51.CB -100. 7.0 9.0 0.068801 bonus Constraint T54.CB A85.CB -100. 7.0 9.0 0.068808 bonus Constraint M59.CB I76.CB -100. 7.0 9.0 0.068251 bonus Constraint A171.CB I194.CB -100. 7.0 9.0 0.069191 bonus Constraint A34.CB M59.CB -100. 7.0 9.0 0.067066 bonus Constraint H60.CB V87.CB -100. 7.0 9.0 0.067725 bonus Constraint S77.CB L134.CB -100. 7.0 9.0 0.068032 bonus Constraint M41.CB L134.CB -100. 7.0 9.0 0.066984 bonus Constraint L81.CB V97.CB -100. 7.0 9.0 0.066425 bonus Constraint A101.CB M133.CB -100. 7.0 9.0 0.065964 bonus Constraint L129.CB I141.CB -100. 7.0 9.0 0.066917 bonus Constraint L134.CB M170.CB -100. 7.0 9.0 0.067671 bonus Constraint L224.CB E233.CB -100. 7.0 9.0 0.067000 bonus Constraint A55.CB M133.CB -100. 7.0 9.0 0.065983 bonus Constraint V127.CB N173.CB -100. 7.0 9.0 0.065339 bonus Constraint V151.CB N173.CB -100. 7.0 9.0 0.065709 bonus Constraint A35.CB V47.CB -100. 7.0 9.0 0.062585 bonus Constraint A35.CB N53.CB -100. 7.0 9.0 0.062917 bonus Constraint A35.CB L129.CB -100. 7.0 9.0 0.063607 bonus Constraint I38.CB T79.CB -100. 7.0 9.0 0.064065 bonus Constraint I52.CB V87.CB -100. 7.0 9.0 0.064863 bonus Constraint A55.CB S78.CB -100. 7.0 9.0 0.064861 bonus Constraint C30.CB L45.CB -100. 7.0 9.0 0.062412 bonus Constraint Q39.CB N53.CB -100. 7.0 9.0 0.062861 bonus Constraint M41.CB I75.CB -100. 7.0 9.0 0.063846 bonus Constraint I52.CB S78.CB -100. 7.0 9.0 0.063858 bonus Constraint I56.CB F68.CB -100. 7.0 9.0 0.064652 bonus Constraint E130.CB L175.CB -100. 7.0 9.0 0.064660 bonus Constraint V150.CB M170.CB -100. 7.0 9.0 0.064436 bonus Constraint S167.CB L230.CB -100. 7.0 9.0 0.064295 bonus Constraint A171.CB C193.CB -100. 7.0 9.0 0.064839 bonus Constraint L175.CB I189.CB -100. 7.0 9.0 0.065245 bonus Constraint L134.CB D149.CB -100. 7.0 9.0 0.062624 bonus Constraint L134.CB V150.CB -100. 7.0 9.0 0.063215 bonus Constraint L134.CB L196.CB -100. 7.0 9.0 0.064102 bonus Constraint A84.CB M133.CB -100. 7.0 9.0 0.062836 bonus Constraint T114.CB L129.CB -100. 7.0 9.0 0.062866 bonus Constraint C30.CB M41.CB -100. 7.0 9.0 0.061197 bonus Constraint L37.CB I56.CB -100. 7.0 9.0 0.061788 bonus Constraint A35.CB F139.CB -100. 7.0 9.0 0.060541 bonus Constraint I38.CB M59.CB -100. 7.0 9.0 0.059986 bonus Constraint T51.CB S77.CB -100. 7.0 9.0 0.060793 bonus Constraint A55.CB I75.CB -100. 7.0 9.0 0.061644 bonus Constraint A55.CB L81.CB -100. 7.0 9.0 0.060508 bonus Constraint A55.CB V97.CB -100. 7.0 9.0 0.060631 bonus Constraint I56.CB S78.CB -100. 7.0 9.0 0.061211 bonus Constraint L83.CB L134.CB -100. 7.0 9.0 0.061032 bonus Constraint A85.CB V97.CB -100. 7.0 9.0 0.061450 bonus Constraint A171.CB F234.CB -100. 7.0 9.0 0.061914 bonus Constraint V192.CB L230.CB -100. 7.0 9.0 0.062178 bonus Constraint M41.CB A55.CB -100. 7.0 9.0 0.059676 bonus Constraint I75.CB A85.CB -100. 7.0 9.0 0.060139 bonus Constraint S78.CB M133.CB -100. 7.0 9.0 0.060667 bonus Constraint C153.CB A190.CB -100. 7.0 9.0 0.061167 bonus Constraint L126.CB L137.CB -100. 7.0 9.0 0.059777 bonus Constraint A171.CB A190.CB -100. 7.0 9.0 0.060647 bonus Constraint A171.CB L196.CB -100. 7.0 9.0 0.060830 bonus Constraint G42.CA V57.CB -100. 7.0 9.0 0.059238 bonus Constraint T54.CB F139.CB -100. 7.0 9.0 0.058532 bonus Constraint M59.CB S77.CB -100. 7.0 9.0 0.059492 bonus Constraint M59.CB L83.CB -100. 7.0 9.0 0.059321 bonus Constraint V150.CB S167.CB -100. 7.0 9.0 0.059188 bonus Constraint S167.CB V192.CB -100. 7.0 9.0 0.059095 bonus Constraint R31.CB S77.CB -100. 7.0 9.0 0.057970 bonus Constraint I56.CB N74.CB -100. 7.0 9.0 0.057921 bonus Constraint H60.CB D149.CB -100. 7.0 9.0 0.057836 bonus Constraint S78.CB L105.CB -100. 7.0 9.0 0.058066 bonus Constraint N173.CB I189.CB -100. 7.0 9.0 0.057588 bonus Constraint S174.CB I189.CB -100. 7.0 9.0 0.058403 bonus Constraint C191.CB F234.CB -100. 7.0 9.0 0.058499 bonus Constraint R31.CB T54.CB -100. 7.0 9.0 0.056642 bonus Constraint A34.CB N74.CB -100. 7.0 9.0 0.055328 bonus Constraint A35.CB M59.CB -100. 7.0 9.0 0.056097 bonus Constraint I38.CB S78.CB -100. 7.0 9.0 0.056160 bonus Constraint Q39.CB F139.CB -100. 7.0 9.0 0.056854 bonus Constraint M41.CB S77.CB -100. 7.0 9.0 0.056127 bonus Constraint M59.CB F68.CB -100. 7.0 9.0 0.055789 bonus Constraint M59.CB K73.CB -100. 7.0 9.0 0.056519 bonus