Best Alignments for T0337

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cg4A/T0337-2cg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cg4A/T0337-2cg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2463e-223.82e-87
2cfxA/T0337-2cfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfxA/T0337-2cfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2320e-204.03e-78
1ri7A/T0337-1ri7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ri7A/T0337-1ri7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2163e-173.39e-79 a.4.5.32
d.58.4.2
1sfxA/T0337-1sfxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sfxA/T0337-1sfxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4364e-075.12e-31 a.4.5.50
1ulyA/T0337-1ulyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ulyA/T0337-1ulyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6588e-068.31e-30
2a61A/T0337-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0337-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2799e-061.15e-27
2fbiA/T0337-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0337-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2123e-059.28e-24
1ub9A/T0337-1ub9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0337-1ub9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7309e-045.63e-18 a.4.5.28
2fbhA/T0337-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbhA/T0337-2fbhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8764e-042.39e-24
1u2wA/T0337-1u2wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u2wA/T0337-1u2wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6030e-041.00e-26

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001