Best Alignments for T0335

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2amyA/T0335-2amyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2amyA/T0335-2amyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8200e-011.18e-04
1t3wA/T0335-1t3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t3wA/T0335-1t3wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3387e+001.13e-02
1b5sA/T0335-1b5sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b5sA/T0335-1b5sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9200e+002.38e-02 1eaf c.43.1.1
1y96B/T0335-1y96B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y96B/T0335-1y96B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6783e+001.30e+00
1lj9A/T0335-1lj9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lj9A/T0335-1lj9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4628e+009.17e-05 a.4.5.28
1wmhA/T0335-1wmhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wmhA/T0335-1wmhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9719e+002.30e-02
2au5A/T0335-2au5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2au5A/T0335-2au5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1205e+001.96e-06
1xhdA/T0335-1xhdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xhdA/T0335-1xhdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2600e+002.52e-05
1v3hA/T0335-1v3hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v3hA/T0335-1v3hA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3300e+006.52e-01 c.1.8.1
1wdtA/T0335-1wdtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdtA/T0335-1wdtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4214e+002.02e-05

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001