Best Alignments for T0334

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2aqjA/T0334-2aqjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aqjA/T0334-2aqjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7782e-581.17e-279
1cj3A/T0334-1cj3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cj3A/T0334-1cj3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0811e-152.31e-100 1pbe c.3.1.2
d.16.1.2
1ykjA/T0334-1ykjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ykjA/T0334-1ykjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3521e-151.12e-102
1pn0A/T0334-1pn0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pn0A/T0334-1pn0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0468e-133.37e-89 c.3.1.2
c.47.1.10
d.16.1.2
1pj5A/T0334-1pj5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pj5A/T0334-1pj5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0027e-137.00e-78 b.44.2.1
c.3.1.2
d.16.1.5
d.250.1.1
1ng4A/T0334-1ng4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ng4A/T0334-1ng4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6278e-126.45e-75 c.3.1.2
d.16.1.3
1ryiA/T0334-1ryiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ryiA/T0334-1ryiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3296e-113.43e-74
1c0pA/T0334-1c0pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c0pA/T0334-1c0pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4847e-094.57e-58 1an9A c.4.1.2
d.16.1.3
2cvjA/T0334-2cvjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cvjA/T0334-2cvjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6366e-081.09e-56
2fjbA/T0334-2fjbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fjbA/T0334-2fjbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4219e-087.75e-59

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001