Best Alignments for T0331

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1g79A/T0331-1g79A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g79A/T0331-1g79A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9768e-151.60e-86 1ci0A b.45.1.1
1ty9A/T0331-1ty9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0331-1ty9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1219e-115.70e-66
1t9mA/T0331-1t9mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t9mA/T0331-1t9mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9043e-095.58e-68
1rfeA/T0331-1rfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0331-1rfeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0021e-096.02e-42
2fhqA/T0331-2fhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0331-2fhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1701e-091.13e-46
2fg9A/T0331-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0331-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9371e-062.78e-33
2aq6A/T0331-2aq6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0331-2aq6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7259e-061.49e-29
2asfA/T0331-2asfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2asfA/T0331-2asfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5534e-057.94e-35
1w9aA/T0331-1w9aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9aA/T0331-1w9aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6345e-051.16e-24
2furA/T0331-2furA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2furA/T0331-2furA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5681e-052.18e-31

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001