Best Alignments for T0330

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0330-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0330-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3274e-221.45e-108
2fdrA/T0330-2fdrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0330-2fdrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5515e-213.68e-111
1te2A/T0330-1te2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0330-1te2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5705e-194.50e-96 c.108.1.6
2gfhA/T0330-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0330-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5287e-181.55e-94
2go7A/T0330-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0330-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9594e-187.37e-95
1x42A/T0330-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0330-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1082e-171.78e-84
1swvA/T0330-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0330-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7629e-162.95e-83
1rqlA/T0330-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rqlA/T0330-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8486e-162.83e-87 c.108.1.3
2fi1A/T0330-2fi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi1A/T0330-2fi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9562e-161.56e-86
1jud/T0330-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0330-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6908e-153.36e-81 1qq5A c.108.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001