Best Alignments for T0330

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0330-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0330-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4518e-245.14e-106
2gfhA/T0330-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0330-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3838e-236.93e-101
2fdrA/T0330-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0330-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4585e-239.90e-97
1te2A/T0330-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0330-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9726e-231.56e-96 c.108.1.6
1x42A/T0330-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0330-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6724e-221.91e-99
1zrn/T0330-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrn/T0330-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2160e-221.07e-91 1qq5A c.108.1.1
1l7mA/T0330-1l7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l7mA/T0330-1l7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7437e-201.03e-73 c.108.1.4
2go7A/T0330-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0330-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5568e-203.16e-91
1rdfA/T0330-1rdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rdfA/T0330-1rdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2561e-192.17e-81 c.108.1.3
1swvA/T0330-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0330-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6113e-182.11e-85

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001