Best Alignments for T0330

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1bw6A/T0330-1bw6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bw6A/T0330-1bw6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1700e-011.80e+00 1bw6A a.4.1.7
1hlvA/T0330-1hlvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hlvA/T0330-1hlvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7817e+005.62e-01 a.4.1.7
a.4.1.7
1huuA/T0330-1huuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1huuA/T0330-1huuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9495e+005.82e-06 1huuA a.55.1.1
1s69A/T0330-1s69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s69A/T0330-1s69A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5942e+008.20e-06 a.1.1.1
2cg4A/T0330-2cg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cg4A/T0330-2cg4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7855e+002.08e-07
1fvkA/T0330-1fvkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fvkA/T0330-1fvkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4014e+001.69e-08 1fvkA c.47.1.13
1u3aA/T0330-1u3aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u3aA/T0330-1u3aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4418e+001.38e-09
1zljA/T0330-1zljA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zljA/T0330-1zljA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5111e+002.91e-05
1whzA/T0330-1whzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1whzA/T0330-1whzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1094e+003.51e-03
2cfxA/T0330-2cfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cfxA/T0330-2cfxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2820e+001.23e-03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001