Best Alignments for T0329

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0329-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0329-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4550e-211.80e-103
1zrn/T0329-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrn/T0329-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3145e-201.76e-94 1qq5A c.108.1.1
2gfhA/T0329-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0329-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0828e-201.21e-96
2fdrA/T0329-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0329-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4267e-194.71e-96
1te2A/T0329-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0329-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5609e-193.74e-96 c.108.1.6
1x42A/T0329-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0329-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6971e-195.54e-93
1swvA/T0329-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0329-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0730e-182.50e-95
1l7mA/T0329-1l7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1l7mA/T0329-1l7mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2682e-181.84e-77 c.108.1.4
1rdfA/T0329-1rdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rdfA/T0329-1rdfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9937e-172.74e-80 c.108.1.3
2go7A/T0329-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0329-2go7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0521e-171.74e-89

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001