Best Alignments for T0327

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tbxA/T0327-1tbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbxA/T0327-1tbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3809e-029.87e-20 a.4.5.48
1ub9A/T0327-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0327-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2668e-026.27e-12 a.4.5.28
2a61A/T0327-2a61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0327-2a61A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3459e-019.32e-14
2fbiA/T0327-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0327-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7929e-012.64e-13
1yyvA/T0327-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yyvA/T0327-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9368e-017.74e-11
2fswA/T0327-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0327-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2897e-013.51e-12
1mkmA/T0327-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkmA/T0327-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4722e-012.25e-08 a.4.5.33
d.110.2.2
1z7uA/T0327-1z7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z7uA/T0327-1z7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2663e-014.72e-13
2co5A/T0327-2co5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2co5A/T0327-2co5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0686e-011.62e-12
2f2eA/T0327-2f2eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f2eA/T0327-2f2eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7424e-011.29e-06

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001