Best Alignments for T0327

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xmaA/T0327-1xmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xmaA/T0327-1xmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5025e-032.18e-19
1tbxA/T0327-1tbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbxA/T0327-1tbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3196e-039.87e-20 a.4.5.48
1ub9A/T0327-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0327-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5290e-026.27e-12 a.4.5.28
2fbiA/T0327-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0327-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6425e-022.64e-13
1yyvA/T0327-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yyvA/T0327-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7973e-027.74e-11
2g7uA/T0327-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0327-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6565e-011.83e-11
1r7jA/T0327-1r7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r7jA/T0327-1r7jA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7234e-016.82e-16 a.4.5.49
1an7A/T0327-1an7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1an7A/T0327-1an7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8077e-011.20e-09 1seiA d.140.1.1
1e2xA/T0327-1e2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e2xA/T0327-1e2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9169e-018.43e-12 1e2xA a.4.5.6
a.78.1.1
1mkmA/T0327-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mkmA/T0327-1mkmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9921e-012.25e-08 a.4.5.33
d.110.2.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001