Best Alignments for T0327

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tbxA/T0327-1tbxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbxA/T0327-1tbxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1640e-021.19e-11 a.4.5.48
1ub9A/T0327-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0327-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2121e-012.78e-08 a.4.5.28
2fswA/T0327-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0327-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6772e-016.69e-08
2a61A/T0327-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0327-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6622e-015.33e-07
1rxwA/T0327-1rxwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxwA/T0327-1rxwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8891e-012.71e-04 a.60.7.1
c.120.1.2
1wa3A/T0327-1wa3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wa3A/T0327-1wa3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9509e-016.86e-08
2fbiA/T0327-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0327-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1561e-012.55e-04
2f2eA/T0327-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f2eA/T0327-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6495e-016.22e-06
1z7uA/T0327-1z7uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z7uA/T0327-1z7uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7068e-015.67e-08
2co5A/T0327-2co5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2co5A/T0327-2co5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9287e-015.56e-08

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001