Best Alignments for T0327

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1yyvA/T0327-1yyvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yyvA/T0327-1yyvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0647e-025.79e-09
1ub9A/T0327-1ub9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0327-1ub9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4589e-027.92e-09 a.4.5.28
1tbxA/T0327-1tbxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbxA/T0327-1tbxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1597e-028.70e-12 a.4.5.48
2a61A/T0327-2a61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0327-2a61A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0337e-018.28e-07
2fswA/T0327-2fswA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0327-2fswA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0463e-012.50e-08
1wa3A/T0327-1wa3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wa3A/T0327-1wa3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9730e-013.17e-09
1vlwA/T0327-1vlwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vlwA/T0327-1vlwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6220e-011.49e-07 c.1.10.1
2axpA/T0327-2axpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2axpA/T0327-2axpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9882e-016.26e-12
2f2eA/T0327-2f2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f2eA/T0327-2f2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2883e-015.92e-05
2fbiA/T0327-2fbiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0327-2fbiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2200e-011.98e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001