Best Alignments for T0327

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tbxA/T0327-1tbxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbxA/T0327-1tbxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.2913e-044.93e-19 a.4.5.48
1ub9A/T0327-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0327-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9983e-031.63e-13 a.4.5.28
2a61A/T0327-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0327-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0485e-033.37e-15
2fbiA/T0327-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0327-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0450e-027.55e-15
2f2eA/T0327-2f2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f2eA/T0327-2f2eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3805e-022.30e-12
2g7uA/T0327-2g7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0327-2g7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9712e-029.93e-12
1z7uA/T0327-1z7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z7uA/T0327-1z7uA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0372e-021.41e-15
2fswA/T0327-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0327-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8294e-023.28e-14
1r7jA/T0327-1r7jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r7jA/T0327-1r7jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8357e-021.41e-14 a.4.5.49
1xmaA/T0327-1xmaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xmaA/T0327-1xmaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3553e-021.73e-16

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001