Best Alignments for T0327

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tbxA/T0327-1tbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbxA/T0327-1tbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6604e-039.73e-17 a.4.5.48
1xmaA/T0327-1xmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xmaA/T0327-1xmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9597e-032.85e-16
1ub9A/T0327-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0327-1ub9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9524e-031.41e-09 a.4.5.28
2fbiA/T0327-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0327-2fbiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3278e-031.61e-12
1yyvA/T0327-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yyvA/T0327-1yyvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0193e-022.68e-10
1z7uA/T0327-1z7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z7uA/T0327-1z7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8027e-026.82e-13
1e2xA/T0327-1e2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e2xA/T0327-1e2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2506e-024.12e-09 1e2xA a.4.5.6
a.78.1.1
2g7uA/T0327-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0327-2g7uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3074e-028.20e-10
3rubS/T0327-3rubS-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3rubS/T0327-3rubS-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8231e-024.87e-09 1rboC d.73.1.1
2fswA/T0327-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0327-2fswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2971e-022.27e-11

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001