Best Alignments for T0327

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tbxA/T0327-1tbxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tbxA/T0327-1tbxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7206e-031.06e-18 a.4.5.48
2a61A/T0327-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a61A/T0327-2a61A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9068e-033.37e-15
2f2eA/T0327-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f2eA/T0327-2f2eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8014e-033.63e-12
1ub9A/T0327-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ub9A/T0327-1ub9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5061e-021.63e-13 a.4.5.28
2g7uA/T0327-2g7uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g7uA/T0327-2g7uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6864e-026.11e-11
2fswA/T0327-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fswA/T0327-2fswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7439e-023.28e-14
2fbiA/T0327-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbiA/T0327-2fbiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8761e-027.55e-15
1z7uA/T0327-1z7uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z7uA/T0327-1z7uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7055e-021.43e-15
1r7jA/T0327-1r7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1r7jA/T0327-1r7jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3034e-021.10e-13 a.4.5.49
1p4xA/T0327-1p4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1p4xA/T0327-1p4xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6909e-025.23e-08 a.4.5.28
a.4.5.28

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001