Sequence numbers correspond to the following labels:

1. • T0327 SR346, Bacillus subtlis, 102 res
2. • gi|2633549|emb|CAB13052.1|_1:94 yjcQ [Bacillus subtilis subsp. subtilis str. 168]
   • gi|16078260|ref|NP_389077.1| hypothetical protein BSU11950 [Bacillus subtilis subsp. subtilis str. 168]
3. • gi|38731447|gb|AAR27377.1|_2:111 putative major head protein [Lactobacillus johnsonii prophage Lj928]
   • gi|41179318|ref|NP_958536.1| putative major head protein [Lactobacillus johnsonii prophage Lj928]
   • gi|42519307|ref|NP_965237.1| Lj928 prophage major head protein [Lactobacillus johnsonii NCC 533]
   • gi|41583595|gb|AAS09203.1| Lj928 prophage major head protein [Lactobacillus johnsonii NCC 533]
4. • gi|58253988|gb|AAV42225.1|_12:123 hypothetical protein LBA0333 [Lactobacillus acidophilus NCFM]
   • gi|58336671|ref|YP_193256.1| hypothetical protein LBA0333 [Lactobacillus acidophilus NCFM]
5. • gi|13487834|ref|NP_108712.1|_1:108 unknown [Bacteriophage Tuc2009]
   • gi|13346849|gb|AAK19861.1| unknown [Bacteriophage Tuc2009]
6. • gi|34763367|ref|ZP_00144320.1|_6:103 hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
   • gi|27886981|gb|EAA24100.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256]

                       10                       20            30       
                       |                        |             |       
   1 ...MNKD...K...LRYAI...LKEI...F....EGN.....TP....LSENDIGVTEDQFDDAV
   2 ...MNKD...K...LRYAI...LKEI...F....EGN.....TP....LSENDIGVTEDQFDDAV
   3 m..AHNDyf.T...VAYKIlsyLKYC...Ye...EGQ.....NPdldiLDAPTFKISNNQFYKTL
   4 dlkANKNnyfN...IAYKIllyLKYC...Y....ENGiev..DPdi..LSSENIGISEKQFVLTL
   5 ...MAKD...DffyISYKI...LAYL...YhamkKGEki...DPgv..FDPQNYRVSYPYLNDIL
   6 ...----...T...TIFQI...LKAIdvaF....ENQdfnyeTT....LDLKKLKISKHRLELFI


       40          50             60           70        80        90  
       |           |              |            |         |         |  
   1 NFLKREGYIIG..VHY..SD..DRPHLY.KLG.P.EL.TEKGENYLKENGTWSKAYKTIKEIKDW
   2 NFLKREGYIIG..VHY..SD..DRPHLY.KLG.P.EL.TEKGENYLKENGTWSKAYKTIKEIKDW
   3 MMLMDDGYIKG..LKF..TPt.KTGTIVsNMD.R.VYiTSDGLQYLEENTMMKKAYKIFKEVRDW
   4 QMLLEDGYIKG..VSL..KPtiQGPTIIcNIQ.D.TYaTSSGLQYLIENSMMHKAYKVSKEVRDW
   5 EELKENGYIKG..VSFieTK..DGKLIT.GLS.DiKI.TIKGIEYLDDNSMMKKAYKTLKELKDW
   6 EELVDKNYIKGltVRH..SI..NGNPII.SIGnP.RL.TLDGLDFLENNSSMKKAYKFLKEAKEW


           100  
            |  
   1 IKLEHHHHHH
   2 IK--------
   3 LPLMK-----
   4 IPLLK-----
   5 IPGT------
   6 IPGL------