Best Alignments for T0326

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ghrA/T0326-2ghrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ghrA/T0326-2ghrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6418e-431.81e-165
1wl8A/T0326-1wl8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wl8A/T0326-1wl8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6338e-211.34e-68
1o1yA/T0326-1o1yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o1yA/T0326-1o1yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8774e-204.62e-78 c.23.16.1
1gpmA/T0326-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0326-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1464e-192.87e-61 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1a9xB/T0326-1a9xB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a9xB/T0326-1a9xB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5639e-152.39e-56 1c3oB c.8.3.1
c.23.16.1
1vcoA/T0326-1vcoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vcoA/T0326-1vcoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7520e-131.73e-52 c.23.16.1
c.37.1.10
1g2iA/T0326-1g2iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g2iA/T0326-1g2iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4177e-125.12e-46 1g2iA c.23.16.2
2abwA/T0326-2abwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2abwA/T0326-2abwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2110e-105.28e-42
1t3tA/T0326-1t3tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t3tA/T0326-1t3tA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4180e-092.35e-43 a.5.10.1
c.23.16.1
d.284.1.2
d.79.4.1
d.79.4.1
d.139.1.1
d.139.1.1
2fexA/T0326-2fexA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fexA/T0326-2fexA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3164e-073.70e-33

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001