Best Alignments for T0323

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ornA/T0323-1ornA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ornA/T0323-1ornA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6996e-256.49e-104 a.96.1.1
1mun/T0323-1mun-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mun/T0323-1mun-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6881e-222.13e-88 1mun a.96.1.2
1mpgA/T0323-1mpgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mpgA/T0323-1mpgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0127e-211.31e-77 1mpgA a.96.1.3
d.129.1.2
1pu6A/T0323-1pu6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pu6A/T0323-1pu6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2136e-145.51e-55 a.96.1.5
1rrsA/T0323-1rrsA-t04-local-adpstyle1.a2m 1rrsA/T0323-1rrsA-t04-local-adpstyle1.al 1.3135e-039.61e-47 a.96.1.2
d.113.1.3
1yqkA/T0323-1yqkA-t04-local-adpstyle1.a2m 1yqkA/T0323-1yqkA-t04-local-adpstyle1.al 8.2783e-034.33e-42
1yqrA/T0323-1yqrA-t04-local-adpstyle1.a2m 1yqrA/T0323-1yqrA-t04-local-adpstyle1.al 9.7631e-032.48e-41
2csbA/T0323-2csbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2csbA/T0323-2csbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8701e-035.25e-15
1lmzA/T0323-1lmzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lmzA/T0323-1lmzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6482e-022.20e-23 a.96.1.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001