Best Alignments for T0323

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ornA/T0323-1ornA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ornA/ 1.1952e-242.84e-93 a.96.1.1
1mun/T0323-1mun-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mun/ 3.5532e-222.56e-80 1mun a.96.1.2
1ko9A/T0323-1ko9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ko9A/ 6.0100e-228.94e-78 a.96.1.3
1pu6A/T0323-1pu6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pu6A/ 9.2405e-155.51e-55 a.96.1.5
1rrsA/T0323-1rrsA-t04-local-adpstyle1.a2m 1rrsA/ 3.8392e-119.61e-47 a.96.1.2
1yqkA/T0323-1yqkA-t04-local-adpstyle1.a2m 1yqkA/ 7.7123e-104.33e-42
1yqrA/T0323-1yqrA-t04-local-adpstyle1.a2m 1yqrA/ 1.1381e-092.48e-41
2csbA/T0323-2csbA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2csbA/ 5.6241e-035.25e-15

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001