Best Alignments for T0322

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zkiA/T0322-1zkiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkiA/T0322-1zkiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0797e-175.49e-57
2b6eA/T0322-2b6eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b6eA/T0322-2b6eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2809e-161.09e-57
1o0iA/T0322-1o0iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o0iA/T0322-1o0iA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8272e-162.36e-56 d.38.1.5
2fs2A/T0322-2fs2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fs2A/T0322-2fs2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6821e-166.24e-54
1wluA/T0322-1wluA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wluA/T0322-1wluA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0617e-151.18e-54
1yliA/T0322-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0322-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9398e-152.52e-48
1vpmA/T0322-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0322-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3040e-142.60e-46
1u1zA/T0322-1u1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u1zA/T0322-1u1zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3315e-141.63e-54 d.38.1.6
2gvhA/T0322-2gvhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gvhA/T0322-2gvhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8940e-135.75e-42
1yocA/T0322-1yocA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yocA/T0322-1yocA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0733e-137.95e-46

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001