Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vpdA/T0321-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpdA/T0321-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8520e-026.27e-17
1wwkA/T0321-1wwkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0321-1wwkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0334e-022.61e-16
1xdwA/T0321-1xdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0321-1xdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7502e-027.69e-13
1vmeA/T0321-1vmeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vmeA/T0321-1vmeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0328e-011.75e-20 c.23.5.1
d.157.1.3
1sc6A/T0321-1sc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sc6A/T0321-1sc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0354e-014.62e-17
1np3A/T0321-1np3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1np3A/T0321-1np3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0638e-015.14e-14 a.100.1.2
c.2.1.6
1y81A/T0321-1y81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y81A/T0321-1y81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7916e-011.51e-18
1y0eA/T0321-1y0eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y0eA/T0321-1y0eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1351e-014.48e-12
2g76A/T0321-2g76A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g76A/T0321-2g76A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1717e-012.16e-19
1j4aA/T0321-1j4aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j4aA/T0321-1j4aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4732e-012.35e-10 c.2.1.4
c.23.12.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001