Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1yrlA/T0321-1yrlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yrlA/T0321-1yrlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3212e-021.04e-17
1vmeA/T0321-1vmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vmeA/T0321-1vmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6685e-021.04e-18 c.23.5.1
d.157.1.3
1xdwA/T0321-1xdwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0321-1xdwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7366e-021.80e-12
2nadA/T0321-2nadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nadA/T0321-2nadA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2949e-011.38e-17 2nadA c.2.1.4
c.23.12.1
1sc6A/T0321-1sc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sc6A/T0321-1sc6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4056e-013.04e-13
1wwkA/T0321-1wwkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0321-1wwkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2273e-011.36e-12
1jysA/T0321-1jysA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jysA/T0321-1jysA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2393e-013.22e-09 c.56.2.1
1np3A/T0321-1np3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1np3A/T0321-1np3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6134e-017.65e-11 a.100.1.2
c.2.1.6
1psdA/T0321-1psdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1psdA/T0321-1psdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1285e-011.02e-11 1psdA c.2.1.4
c.23.12.1
d.58.18.1
1y80A/T0321-1y80A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y80A/T0321-1y80A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2752e-013.20e-13

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001