a2m2html output for tmp.a2m

Citations (SAM, SAM-T99, HMMs)

R. Hughey, A. Krogh, Hidden Markov models for sequence analysis: Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting remote protein homologies, Bioinformatics 14(10):846-856, 1998.
A. Krogh et al., Hidden Markov models in computational biology: Applications to protein modeling, JMB 235:1501-1531, Feb 1994.

Sequence numbers correspond to the following labels:

- T0321
- gi|89335284|dbj|BAE84879.1|_107:250 hypothetical protein [Desulfitobacterium hafniense Y51]
- gi|89895836|ref|YP_519323.1| hypothetical protein DSY3090 [Desulfitobacterium hafniense Y51]
- gi|68207206|ref|ZP_00559375.1|_107:250 conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
- gi|68168883|gb|EAM96800.1| conserved hypothetical protein [Desulfitobacterium hafniense DCB-2]
- gi|83590272|ref|YP_430281.1|_105:239 Protein of unknown function DUF364 [Moorella thermoacetica ATCC 39073]
- gi|83573186|gb|ABC19738.1| Protein of unknown function DUF364 [Moorella thermoacetica ATCC 39073]
- gi|71492533|gb|EAO24837.1|_108:242 Protein of unknown function DUF364 [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
- gi|71540788|ref|ZP_00662619.1| Protein of unknown function DUF364 [Syntrophomonas wolfei str. Goettingen]
- gi|67155965|ref|ZP_00417592.1|_130:264 conserved hypothetical protein [Azotobacter vinelandii AvOP]
- gi|67086909|gb|EAM06377.1| conserved hypothetical protein [Azotobacter vinelandii AvOP]
- gi|83590275|ref|YP_430284.1|_96:232 Protein of unknown function DUF364 [Moorella thermoacetica ATCC 39073]
- gi|83573189|gb|ABC19741.1| Protein of unknown function DUF364 [Moorella thermoacetica ATCC 39073]
- gi|53802964|ref|YP_115228.1|_111:249 hypothetical protein MCA2834 [Methylococcus capsulatus str. Bath]
- gi|53756725|gb|AAU91016.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
- gi|76666845|emb|CAJ31222.1|_225:364 Protein containing DUF364 [uncultured sulfate-reducing bacterium]
- gi|68247943|gb|EAN30026.1|_113:250 conserved hypothetical protein [Magnetococcus sp. MC-1]
- gi|69255578|ref|ZP_00605320.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
- gi|71836803|ref|ZP_00676571.1|_174:316 conserved hypothetical protein [Pelobacter propionicus DSM 2379]
- gi|71743015|gb|EAO38165.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379]
- gi|88602604|ref|YP_502782.1|_100:232 protein of unknown function DUF364 [Methanospirillum hungatei JF-1]
- gi|88188066|gb|ABD41063.1| protein of unknown function DUF364 [Methanospirillum hungatei JF-1]
- gi|15622183|dbj|BAB66175.1|_91:236 242aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7]
- gi|15921397|ref|NP_377066.1| hypothetical protein ST1140 [Sulfolobus tokodaii str. 7]
- gi|71838370|ref|ZP_00678130.1|_122:260 conserved hypothetical protein [Pelobacter propionicus DSM 2379]
- gi|71741271|gb|EAO36429.1| conserved hypothetical protein [Pelobacter propionicus DSM 2379]
- gi|85860385|ref|YP_462587.1|_106:246 hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
- gi|85723476|gb|ABC78419.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
- gi|3257931|dbj|BAA30614.1|_104:246 248aa long hypothetical protein [Pyrococcus horikoshii OT3]
- gi|14591289|ref|NP_143367.1| hypothetical protein PH1506 [Pyrococcus horikoshii OT3]
- gi|50877858|emb|CAG37698.1|_117:255 hypothetical protein [Desulfotalea psychrophila LSv54]
- gi|51246821|ref|YP_066705.1| hypothetical protein DP2969 [Desulfotalea psychrophila LSv54]
- gi|5458088|emb|CAB49577.1|_106:242 Hypothetical protein [Pyrococcus abyssi GE5]
- gi|14520871|ref|NP_126346.1| hypothetical protein PAB1928 [Pyrococcus abyssi GE5]
- gi|2496012|sp|Q57923|Y500_METJA_111:250 Hypothetical protein MJ0500 [Taxonomy]
- gi|1591203|gb|AAB98491.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661]
- gi|15668677|ref|NP_247476.1| hypothetical protein MJ0500 [Methanocaldococcus jannaschii DSM 2661]
- gi|57158969|dbj|BAD84899.1|_97:242 hypothetical protein, conserved, DUF364 family [Thermococcus kodakarensis KOD1]
- gi|57640645|ref|YP_183123.1| hypothetical protein TK0710 [Thermococcus kodakarensis KOD1]
- gi|88603265|ref|YP_503443.1|_131:267 hypothetical protein Mhun_2014 [Methanospirillum hungatei JF-1]
- gi|88188727|gb|ABD41724.1| hypothetical protein Mhun_2014 [Methanospirillum hungatei JF-1]
- gi|71548126|ref|ZP_00668568.1|_88:226 similar to Uncharacterized conserved protein [Syntrophobacter fumaroxidans MPOB]
- gi|71486392|gb|EAO18905.1| similar to Uncharacterized conserved protein [Syntrophobacter fumaroxidans MPOB]
- gi|39934461|ref|NP_946737.1|_282:412 hypothetical protein RPA1387 [Rhodopseudomonas palustris CGA009]
- gi|46425450|emb|CAE26830.2|_270:400 conserved unknown protein [Rhodopseudomonas palustris CGA009]
- gi|51855481|dbj|BAD39639.1|_114:253 conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863]
- gi|51891792|ref|YP_074483.1| hypothetical protein STH654 [Symbiobacterium thermophilum IAM 14863]
- gi|85860606|ref|YP_462808.1|_106:232 hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
- gi|85723697|gb|ABC78640.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
- gi|71676114|ref|ZP_00673857.1|_114:254 similar to Uncharacterized conserved protein [Trichodesmium erythraeum IMS101]
- gi|71670975|gb|EAO27642.1| similar to Uncharacterized conserved protein [Trichodesmium erythraeum IMS101]
- gi|45047322|emb|CAF29755.1|_101:245 conserved hypothetical archaeal protein [Methanococcus maripaludis S2]
- gi|45357762|ref|NP_987319.1| hypothetical protein MMP0199 [Methanococcus maripaludis S2]
- gi|2622022|gb|AAB85423.1|_85:226 conserved protein [Methanothermobacter thermautotrophicus str. Delta H]
- gi|15678945|ref|NP_276062.1| hypothetical protein MTH925 [Methanothermobacter thermautotrophicus str. Delta H]
- gi|83309251|ref|YP_419515.1|_294:425 hypothetical protein amb0152 [Magnetospirillum magneticum AMB-1]
- gi|82944092|dbj|BAE48956.1| Uncharacterized conserved protein [Magnetospirillum magneticum AMB-1]
- gi|46200693|ref|ZP_00207804.1|_268:399 COG2014: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1]
- gi|83590267|ref|YP_430276.1|_130:272 hypothetical protein Moth_1420 [Moorella thermoacetica ATCC 39073]
- gi|83573181|gb|ABC19733.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
- gi|77919571|ref|YP_357386.1|_109:242 hypothetical protein Pcar_1975 [Pelobacter carbinolicus DSM 2380]
- gi|77545654|gb|ABA89216.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
- gi|19914095|gb|AAM03774.1|_148:294 conserved hypothetical protein [Methanosarcina acetivorans C2A]
- gi|20089219|ref|NP_615294.1| hypothetical protein MA0321 [Methanosarcina acetivorans C2A]
- gi|51855482|dbj|BAD39640.1|_100:236 conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863]
- gi|51891793|ref|YP_074484.1| hypothetical protein STH655 [Symbiobacterium thermophilum IAM 14863]
- gi|21227678|ref|NP_633600.1|_127:267 hypothetical protein MM1576 [Methanosarcina mazei Go1]
- gi|20906071|gb|AAM31272.1| conserved protein [Methanosarcina mazei Go1]
- gi|85860622|ref|YP_462824.1|_139:294 hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
- gi|85723713|gb|ABC78656.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
- gi|72395993|gb|AAZ70266.1|_149:295 conserved hypothetical protein [Methanosarcina barkeri str. fusaro]
- gi|73668831|ref|YP_304846.1| hypothetical protein Mbar_A1303 [Methanosarcina barkeri str. fusaro]
- gi|69936801|ref|ZP_00631556.1|_129:276 similar to Uncharacterized conserved protein [Paracoccus denitrificans PD1222]
- gi|69151824|gb|EAN65006.1| similar to Uncharacterized conserved protein [Paracoccus denitrificans PD1222]
- gi|77918395|ref|YP_356210.1|_118:255 hypothetical protein Pcar_0781 [Pelobacter carbinolicus DSM 2380]
- gi|77544478|gb|ABA88040.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]

              10        20        30                 40                
              |         |         |                  |                
   1 VEDRMNDPFIMSQNEVKGKKVGVVGHFPHLESLLEP.....I....CDLSILEWS.....PE...
   2 --DRMNDPFIMSQNEVKGKKVGVVGHFPHLESLLEP.....I....CDLSILEWS.....PE...
   3 --DRMNDPFIMSQNEVKGKKVGVVGHFPHLESLLEP.....I....CDLSILEWS.....PE...
   4 -----MNAFTCFQEQVRGKKVTVIGHFPDLDPLARN.....-....CKLTILERR.....PR...
   5 ----RANAFTCFLPDIKNKKVAVIGHFPNL-DLLRT.....T....CQLSILERM.....PQ...
   6 ------SVFEHFRPRLEGQKVAVIGHYPGLAQLWKD.....-....LPYRCFERE.....PQ...
   7 ---QDINAGELLIERGAGKRVAVVGHFPFVPGLRRV.....A....RELWVLERR.....PQ...
   8 ------AVFEHFLGEMRGKRVVVIGRYPGLDRFAHA.....Ha...LNLTVLERQ.....PG...
   9 --CVERNAGDLLVERGRNKRVALIGHFPFVPALREA.....A....EHLWVLELR.....PQ...
  10 ----NLAVFDHFRHHLVDKKVVVVGRYPGLERFTEN.....-....HNWHVLERE.....PN...
  11 ---FSRDEVISSLSIAPQERVAMVGYFGPIVAQLEK.....I....GCTLEIVEL.....NPhkg
  12 ---VEMNASEVLMERGAGKNVAIVGHFPFIPKVKKA.....V....KNLWVIEQN.....PL...
  13 -----ANALDLAFQESKDKTVTMVGYFPGYVDKFMK.....K....ARHFYVLEL.....NQnv6
  14 -----DDEVIGSLDIGADDHVAMVGYFAPVVAKIQK.....S....GCRLDIIEM.....NPgr.
  15 -EDKENRALFESFGIGEKTRVAMVGYFAPIAGMLGK.....M....GALLEVIDI.....SK...
  16 ------IDVTELIQQDEIKRIAIIGNMPPVVRTLKE.....K....YEVYVFERN.....MKlwd
  17 ----SQGDFIENFSLQPGMKVGMVGNFAPLVNPIRK.....S....GAELIIFDE.....HPpaf
  18 ------------LVQGDVKRIAVLGNMPPIVKALRS.....K....YEVYVFERN.....PKlwd
  19 ------DAAELVLNRDDIKKIAFVGNMIPVVNMLKK.....Sek..FDIYVFERS.....PSllm
  20 ----DLPDVDVVELVEGFSEVAVIGNMPPVVRALRE.....K....GVKTLVFER.....NPklw
  21 ---IPGNAIDMVRDAAARVPTCFVGYFKEGAEWREM.....G....WPVDIVELF.....PR...
  22 ---STDRLWMDSFGIGSGTRVAMVGFFRPLMKLFRD.....R....GALVEALDD.....FQ...
  23 -------GNGVKTFRHVAGRVGVIGAFPGVDGILP-.....-....-NCAVMEAD.....PR...
  24 -------GNGVKTFRHVAGRVGVIGAFPGVDGILP-.....-....-NCAVMEAD.....PR...
  25 --------AAAAVPARPTDTVGFVGYVGSVVRRVQA.....E....AARTIIFDR.....SQedg
  26 -------AIELVEPAACRIPTCFIGYFKTAAAWREK.....G....YPVTIVELF.....PR...
  27 --PGNLAVFEYFLPMIRGKKVAIIGRYPKLSRYQNE.....-....MEMTVIERQ.....PG...
  28 ---KNEDVLDLIVSDKDIKKIGFVGNIAPVVNELRE.....IdgknYEIYVFERN.....SSscg
  29 ----RCNAFDILMEECRNRKIAMVGEFPRRYTDRIRtv7fyI....LEINPFKVN.....PK...
  30 -----PGGNGLESFGVKGGGTVVIGAFPGIAERLP-.....-....-GAKIVDRK.....PG...
  31 -----PDGNGLESFGVKGGGTVVIGAFPGIAERLP-.....-....-GAKVIDRK.....PG...
  32 -----GANALDQVIIPGEGQVVVVGALAPFLKVLKR.....Q....DCRFTILEL.....DPat8
  33 ----------EPLRITPSCHVVMVGYFGPLVRDLQN.....V....GCRLDIVELds...NR...
  34 ---FQRSYSDILDLIKPGDRVAMIGYFGPLVPKILK.....I....TEKLTVLEKreiesPK...
  35 --CLEDPDALTTVPVRPADTVGLIGFIRSIHRRIEG.....R....VNRIIVFDRsld..GE...
  36 ---------NILDLIKPEDKVAMVGYFGPLVPRILK.....I....TEKLTILEK.....REief
  37 -DFEKSDDLSDVSHLFTGRRVCMVGAIVPLLKRFKK.....M....GVSEIKVID.....RKk11
  38 ---FPASNIDILDLIKPEDRVAMVGYFAPLVPKILK.....I....TNKLTILEKreiesPK...
  39 --VVEDADAFDIARIRPDETAVVVGAFGPFLKALRG.....I....GARHFVLEK.....DPat8
  40 --LDTESDLFDILRLDKSSRVGVVGFFRPMMDKLVE.....K....AGEVVVVEL.....SEdlr


        50        60        70        80        90       100        110
        |         |         |         |         |         |          |
   1 ..EGDYPLPASEFILPECDYVYITCASVVDKTLPRLLELSRNARRITLVGPGTPLAPVLF.EHGL
   2 ..EGDYPLPASEFILPECDYVYITCASVVDKTLPRLLELSRNARRITLVGPGTPLAPVLF.EHGL
   3 ..EGDYPLPASEFILPECDYVYITCASVVDKTLPRLLELSRNARRITLVGPGTPLAPVLF.EHGL
   4 ..EGDLPDPACEYILPEQDYVFITATTLINKTFPRLMELSRRAR-VILVGPSTPMTPVLF.HYGI
   5 ..EGDYPDPACEYILPEQDVVFITGTAFINKTMPRLLSLAKNSR-IILVGPSVPISPVLF.DYGV
   6 ..EGDLPDTAVERLLPEADWVFITASSLANKTLPRLLELSSHAQ-VVLMGPSLPWIYDWR.RFGV
   7 ..SGDLPADEAANVIPGADVVAITGTALINGSMESLLKLCRKDSLVMVLGPTTPLTPLWF.DYGV
   8 ..PDDLPDSACEYLVPEADWVFLTATSIPNKTFPRLAALARDAT-TVLMGPTVPWLPELR.HFGI
   9 ..AGDAGAEEAGAIVPEADVVAITGSAFINKSLEALLGLCRANAFIVVLGPTTPLSPVLF.DYGA
  10 ..AADLPDTACEYVLPQADWVFLTASALVNKSLPRLLTLSRHAV-TVLMGPTLPWWRDWC.HYGV
  11 ..EKTLTPEQGERALGECDVAIITATSLINGTCDDLLAALGKPRAAVLLGPSTPFCPLAFsGTPV
  12 ..EGDHPAHAASDLIPQADVVAITGSSLINHTLDDLLGLCKPEALVVILGPSTPISPVLF.DHGA
  13 tsKNILFSFAAEEVIPKSDIVILTATTIINKSIERLLQLSKSAK-VYLVGPSSPLTDVLF.DYGI
  14 ..GDTLTPEQGRKALADCSVAIITATSLINGTLDELVAGLGSPRAAVILGPSTPLCPEAFqGTKI
  15 ..KIGHQADFYDRLENWAQVAFITSTSILNSTTEDILRHAGKGVKTVMLGPSTPMIGEVFsHLPV
  16 ..RDTYSDTLEYHILPEVDGIIASASCIVNGTLDMILDRAKKAKLIVITGPTGQLLPEFLkGTKV
  17 ..SGIQSPEAIPYLLPACEVAIITGTSIINETFDDLLTHVVDCRYVTVLGPSTPLLADCYaDTPV
  18 ..RETYSDALEYDLLPKMDVIIASASCIVNGTIDMILDRAKKAKLLILTGPTAQLLPEFLkGTKV
  19 ..DGVLSDAFEYRLLPEMDAVFISGTTLLNDTLDFVLDRAKNAKLKILVGPTAQSLPELFkGFGI
  20 d.RETLSDALEYILLPEVEAVIVSGSALVNGTLEMILDRAKKAELVILTGPTAQIHQELVkGTGI
  21 ..PGDIHWNDADEVLSRAQVVLMSGLTVVNETLAAVIRRTPHAKIRIMMGPTVPPSPALF.ACGL
  22 ..GIGDRDSFYGKLDGWAEVLLLTSTSILNHTTEEILGRIAPEVKVVMLGPSTPMVADAFrHLPV
  23 ..PGEYPLAAMDSILPACDATIVNASSLINRTLPRVLRLSQH-RPVALIGPATPMTPRLF.DYGL
  24 ..PGEYPLAAMDSILPACDATIVNASSLINRTLPRVLRLSQH-RPVALIGPATPMTPRLF.DYGL
  25 ..EDVYPESLQPELLPRCDLVFITGSALINRTLERLLTYCTRAREVVLIGPSTPLYPEAFlGSGV
  26 ..PGDIHWNEADEVLEKAELVLMTGLTVVNETLEAVIRRTPSARMRIIMGPTVPASPVLF.DYGI
  27 ..AEDFPDTASEYLLPEAEWVFLTATSIANKTFPRLVELAKNSQ-LVLMGPSMPWLLELK.AFGI
  28 ..AELLDDTFEYRLLPEMDAVIITGTTLVNDTIDVVLERSKNAKLKILTGPTAQINPDFLkNSGI
  29 ..RGVFPETAAEQIIPRVDVLAVTGSTLVNHSTERYLALAELDAFVAIIGPTTPMTDVFF.EYGV
  30 ..PGQYPEQAAEWLLPAAEAVIITASTLANRSAPHLLHLARFAR-VALVGPGAPLTERLL.SYGV
  31 ..PGQYPEAATEWLLPAAEAVIMTASTLANRSAPRLLRLARFAR-VAMVGPGAPLTDRLT.SYGI
  32 elPFYRPPEDAPEVIPWADLLIITGTTLINDTLEGLLSVVKPGAQVVVVGPTASMLPDAFfRRGV
  33 ..PGVLSPQQGQKVLGVCDVAILTGTSLITGTLDELFASLGRPRSAVLLGPSAPLCAEVFaDTPL
  34 ..TRTLPSGKAREILPASDVIILSASTLANRTFDELLSFRGTAREVVLLGPSAPLYPEPFfERGI
  35 ..PGISPEEQQPELLPLCDVVFVTGSAVTNGTLEAVLPWCRRARDIVVIGPSTPLYPEAFaGTGV
  36 seTTILPSEKAREILPASDVIIISASTLANRTFDELLSSRGAAREVVLLGPSAPLYPAPFfSRGI
  37 acGEFLSPEQTAETIAQCETAVFTGAAVANGTIEHLLRLVPKEAAVAVVGPTAGFIPDPLfRRNV
  38 ..TLTLPSEKAREVLPTSDVIILSASTLANRTFDELLSLRGAAREVVLLGPSSPLYPAPFfERGI
  39 emGHFRPAESYPRIVPQADVLLITGTTLVNDSLPGLIACARPEARVVLVGPTVPMLPDAFlDRRG
  40 egSHPFTMTDDPEALRGCDKILITATTVLNDSLLTVIPHCIDAAFVAMMGPTAGFLPDTVfALGV


               120       130       140       
                |         |         |       
   1 QELSGFM..VKDNARAFRIVAGAEKVKIYSAGQKVTIKK
   2 QELSGFM..VKDNARAFRIVAGAEKVKIYSAGQKVTIK-
   3 QELSGFM..VKDNARAFRIVAGAEKVKIYSAGQKVTIK-
   4 DTLAGTV..VVEPKLIRRVVQEGGCLEIFKRGGR-----
   5 DAISSSV..MLDEELVWRAVKQGGKTKAFKSGG------
   6 NYLAGVR..VRDAHAARQVVAEGGGTRLFAGPVEY----
   7 DLVSGTR..VVEPEVVLKFVSEGVVFKQLHGR-------
   8 DYLAGVE..IVDTEVLRDTVCEGGGVRIFDAGVRYRI--
   9 DVVSGTR..VVDPELALRSAGEGATFRQIRGIRL-----
  10 DFLAGVR..IADDKSVRHTAAEGGGVRIFEKGARYH---
  11 THLAGAR..VVDADRVLQVVSQGGGTMRMKPYLS-----
  12 NIIAGSK..IIDENAVLNAIGQGATFQQ-----------
  13 DVIGGVM..VKDEEKLVRAIKNGLHFPFSDYMRRQVLE-
  14 THLAGAR..VQDVDAVQRIISEGGGTMLMKPYL------
  15 HMLAGTV..PLEKEKVLKAIRHGFGTREIQRFS------
  16 THLASMK..VTNIEKALVKLKLGSFKGFESESIKYVI--
  17 SCAAGVR..VRDRDKVVHTVVEAGGTQAFGP--------
  18 THLAAMK..VVDIDRAILKLKLGSFRGFEEGSRKYIV--
  19 THIASTK..IIDVDKALLYLKFASSSMLFKGA-------
  20 THLAAMK..VIDLERALLGLKLGSFRGFEKGNRKYVV--
  21 DLIGVTL..VQNMELMARYAELGGGSIAYSPP-------
  22 RVLAGTV..PVDKEAVLRAVRHGAGTPVIHRFS------
  23 SVLGGLV..VSDPKGLATAIRAGALPREFSRFGR-----
  24 SVLGGLV..VSDPKGLATAIRAGALPREFSRFGR-----
  25 TVLAGFRwqVADPDAALEQVAAGAHFKHLKGRTS-----
  26 DMLGITQ..IDDVELMSNYALLGGGS-------------
  27 NYLAGVT..VSNVEVLKQTVAEGGGVRIFETGVQYQV--
  28 THTASTR..VINIDKTVTDLKHGSSFGIFSRN-------
  29 DMIAGVE..ITDPVNILKKIRFNEGMLHEKD--------
  30 EVSSGLI..AQDPDGLARAVAEGGGAKDLKRFS------
  31 EVSSGLI..ATDPDGMARAVTEGGGAKDLKRHG------
  32 NLLGGTL..VTKPDELLDVLAEAGSGYHFYG--------
  33 TQISGAR..VLDCDSVFRVISEGGGTPLLKRHV------
  34 TAVMGTR..IIDPRAMLTVVSEAGGTKKLHQYCGEK---
  35 TVIAGAT..WPPEHHQAALAGIGEGKA------------
  36 TAIMGTR..IIDPLKMLTVISEAGGTKKLHQFCGEK---
  37 ALVGTAM..VTDIAAALDIIAEGGGAYPLFGRCVKKI--
  38 TAVMGTQ..ILDPITMLTIVSEAGGTKKIHKCCGEK---
  39 MILGTVR..VADAEALHEVLAQGGSGYHFFGKY------
  40 DAVGFTR..VKDLDLFLERFSSGGKW-------------