Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vpdA/T0321-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpdA/T0321-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5042e-036.27e-17
1wwkA/T0321-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0321-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9883e-024.16e-16
1y0eA/T0321-1y0eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y0eA/T0321-1y0eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7034e-026.46e-12
1qmgA/T0321-1qmgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qmgA/T0321-1qmgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5364e-021.94e-18 1qmgA a.100.1.2
c.2.1.6
1y81A/T0321-1y81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y81A/T0321-1y81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8834e-021.51e-18
1sc6A/T0321-1sc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sc6A/T0321-1sc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0170e-014.62e-17
2d0iA/T0321-2d0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d0iA/T0321-2d0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0259e-016.27e-16
1xhcA/T0321-1xhcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xhcA/T0321-1xhcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0354e-011.02e-16
4uagA/T0321-4uagA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 4uagA/T0321-4uagA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0511e-011.00e-16 4uagA c.5.1.1
c.59.1.1
c.72.2.1
1yqdA/T0321-1yqdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yqdA/T0321-1yqdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1871e-014.83e-11

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001