Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xdwA/T0321-1xdwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0321-1xdwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9493e-022.13e-14
1yrlA/T0321-1yrlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yrlA/T0321-1yrlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9635e-024.01e-17
1vmeA/T0321-1vmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vmeA/T0321-1vmeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1723e-011.05e-22 c.23.5.1
d.157.1.3
1wwkA/T0321-1wwkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0321-1wwkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0491e-011.30e-12
1u2zA/T0321-1u2zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u2zA/T0321-1u2zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5365e-011.66e-11 c.66.1.31
1yqdA/T0321-1yqdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yqdA/T0321-1yqdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3102e-011.48e-13
1y80A/T0321-1y80A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y80A/T0321-1y80A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3158e-019.40e-14
1pjqA/T0321-1pjqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pjqA/T0321-1pjqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4597e-013.24e-13 c.2.1.11
c.90.1.1
e.37.1.1
2nacA/T0321-2nacA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2nacA/T0321-2nacA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5852e-015.04e-17 2nadA c.2.1.4
c.23.12.1
1np3A/T0321-1np3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1np3A/T0321-1np3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9184e-011.90e-11 a.100.1.2
c.2.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001