Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1a12A/T0321-1a12A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a12A/T0321-1a12A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0979e+001.46e-06 1a12A b.69.5.1
1sjdA/T0321-1sjdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sjdA/T0321-1sjdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8798e+004.86e-08 c.1.11.2
d.54.1.1
1jtdB/T0321-1jtdB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jtdB/T0321-1jtdB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2424e+003.35e-06 b.69.5.2
1twiA/T0321-1twiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1twiA/T0321-1twiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5315e+002.52e-04 b.49.2.3
c.1.6.1
1neiA/T0321-1neiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1neiA/T0321-1neiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3235e+015.78e+02 d.253.1.1
1i4jA/T0321-1i4jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i4jA/T0321-1i4jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5501e+011.40e-03 d.55.1.1
1mgtA/T0321-1mgtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mgtA/T0321-1mgtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7587e+011.53e-03 1mgtA a.4.2.1
c.55.7.1
1x3mA/T0321-1x3mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x3mA/T0321-1x3mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1124e+017.45e-05
1g99A/T0321-1g99A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g99A/T0321-1g99A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1942e+012.34e-07 1g99A c.55.1.2
c.55.1.2
1to6A/T0321-1to6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1to6A/T0321-1to6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2263e+011.53e-05 c.141.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001