Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1udh/T0321-1udh-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1udh/T0321-1udh-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4785e+001.61e-04 3eugA c.18.1.1
1jtdB/T0321-1jtdB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jtdB/T0321-1jtdB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8189e+004.75e-05 b.69.5.2
1neiA/T0321-1neiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1neiA/T0321-1neiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1115e+005.75e+03 d.253.1.1
1guqA/T0321-1guqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1guqA/T0321-1guqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6166e+009.81e-03 1guqA d.13.1.2
d.13.1.2
1vbuA/T0321-1vbuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbuA/T0321-1vbuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.9421e+008.75e-05
1vhxA/T0321-1vhxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhxA/T0321-1vhxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7952e+004.03e-07 c.55.3.8
2aa4A/T0321-2aa4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aa4A/T0321-2aa4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0727e+011.48e-09
1g99A/T0321-1g99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g99A/T0321-1g99A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1814e+011.04e-05 1g99A c.55.1.2
c.55.1.2
1x3mA/T0321-1x3mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x3mA/T0321-1x3mA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3298e+017.45e-05
1awcA/T0321-1awcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1awcA/T0321-1awcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5163e+011.09e-05 1awcA a.4.5.21

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001