Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1a12A/T0321-1a12A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a12A/T0321-1a12A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8094e+003.08e-06 1a12A b.69.5.1
1az5/T0321-1az5-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1az5/T0321-1az5-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1400e+006.36e+03 1hvc b.50.1.1
1tufA/T0321-1tufA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tufA/T0321-1tufA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5273e+004.64e-03 b.49.2.3
c.1.6.1
1sjdA/T0321-1sjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sjdA/T0321-1sjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4710e+003.62e-06 c.1.11.2
d.54.1.1
1jtdB/T0321-1jtdB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jtdB/T0321-1jtdB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8953e+003.35e-06 b.69.5.2
1g99A/T0321-1g99A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g99A/T0321-1g99A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1856e+003.70e-05 1g99A c.55.1.2
c.55.1.2
1mgtA/T0321-1mgtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mgtA/T0321-1mgtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0081e+011.53e-03 1mgtA a.4.2.1
c.55.7.1
1i4jA/T0321-1i4jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i4jA/T0321-1i4jA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3451e+014.69e-03 d.55.1.1
1to6A/T0321-1to6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1to6A/T0321-1to6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5586e+011.44e-03 c.141.1.1
1neiA/T0321-1neiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1neiA/T0321-1neiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8294e+012.23e+03 d.253.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001