Best Alignments for T0320

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1k8kA/T0320-1k8kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k8kA/T0320-1k8kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4023e+011.12e-01 c.55.1.1
c.55.1.1
1m1fA/T0320-1m1fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m1fA/T0320-1m1fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6927e+016.57e-02 b.34.6.2
1shyA/T0320-1shyA-t2k-local-adpstyle1.a2m 1shyA/T0320-1shyA-t2k-local-adpstyle1.al 1.9175e+013.61e+00 b.47.1.2
1si5H/T0320-1si5H-t2k-local-adpstyle1.a2m 1si5H/T0320-1si5H-t2k-local-adpstyle1.al 1.9264e+013.66e+00
2bkaA/T0320-2bkaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bkaA/T0320-2bkaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3029e+018.35e-02
1gv4A/T0320-1gv4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gv4A/T0320-1gv4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5251e+013.00e-01 c.3.1.5
c.3.1.5
d.87.1.1
2b5xA/T0320-2b5xA-t2k-local-adpstyle1.a2m 2b5xA/T0320-2b5xA-t2k-local-adpstyle1.al 3.8651e+012.68e+01
1zowA/T0320-1zowA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zowA/T0320-1zowA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5120e+013.24e-01
1kn6A/T0320-1kn6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kn6A/T0320-1kn6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6584e+012.05e+03 d.58.3.3
1xmkA/T0320-1xmkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xmkA/T0320-1xmkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4307e+012.50e+03

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001