Best Alignments for T0319

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1rlyA/T0319-1rlyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rlyA/T0319-1rlyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2399e+006.92e-01 g.41.3.1
1yk4A/T0319-1yk4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yk4A/T0319-1yk4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5812e+001.26e+00
1vq0A/T0319-1vq0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vq0A/T0319-1vq0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0368e+003.66e-06
1iro/T0319-1iro-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iro/T0319-1iro-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0998e+001.98e+01 1rb9 g.41.5.1
1zin/T0319-1zin-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zin/T0319-1zin-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1043e+015.75e-02 1zin c.37.1.1
g.41.2.1
1woyA/T0319-1woyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1woyA/T0319-1woyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1428e+011.93e-06
1weoA/T0319-1weoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1weoA/T0319-1weoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2120e+012.05e+01
1wdjA/T0319-1wdjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wdjA/T0319-1wdjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3004e+012.49e-01
1fp1D/T0319-1fp1D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fp1D/T0319-1fp1D-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4094e+011.79e-05 1fpqA a.4.5.29
c.66.1.12
2cc0A/T0319-2cc0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cc0A/T0319-2cc0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4854e+012.26e-08

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001