Best Alignments for T0319

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1dx8A/T0319-1dx8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dx8A/T0319-1dx8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2197e+002.63e+00 1rb9 g.41.5.1
1rlyA/T0319-1rlyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rlyA/T0319-1rlyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5867e+006.92e-01 g.41.3.1
1yk4A/T0319-1yk4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yk4A/T0319-1yk4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8813e+002.89e+00
1vq0A/T0319-1vq0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vq0A/T0319-1vq0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1908e+003.66e-06
1woyA/T0319-1woyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1woyA/T0319-1woyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0079e+013.03e-06
1v87A/T0319-1v87A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v87A/T0319-1v87A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2453e+013.31e+03 g.44.1.1
1aa6/T0319-1aa6-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aa6/T0319-1aa6-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4788e+011.07e-02 2napA b.52.2.2
c.81.1.1
2b5eA/T0319-2b5eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b5eA/T0319-2b5eA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5190e+014.42e-03
1fpqA/T0319-1fpqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fpqA/T0319-1fpqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6150e+015.76e-03 1fpqA a.4.5.29
c.66.1.12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001