Best Alignments for T0318

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1lam/T0318-1lam-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lam/T0318-1lam-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6015e-653.97e-229 1lam c.50.1.1
c.56.5.3
2ewbA/T0318-2ewbA-t06-global-adpstyle1.a2m 2ewbA/T0318-2ewbA-t06-global-adpstyle1.al 1.2430e-023.75e-129
1tkjA/T0318-1tkjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tkjA/T0318-1tkjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0690e-021.80e-34
1qq9A/T0318-1qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qq9A/T0318-1qq9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3097e-021.04e-34 1xjo c.56.5.4
1v71A/T0318-1v71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v71A/T0318-1v71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1741e+001.46e-15
1x13A/T0318-1x13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x13A/T0318-1x13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4259e+001.94e-13
1cg2A/T0318-1cg2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cg2A/T0318-1cg2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8810e+008.58e-21 1cg2A c.56.5.4
d.58.19.1
1ysjA/T0318-1ysjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ysjA/T0318-1ysjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3118e+004.31e-17
1a9xA/T0318-1a9xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a9xA/T0318-1a9xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0343e+011.59e-27 a.92.1.1
c.24.1.1
c.30.1.1
c.30.1.1
d.142.1.2
d.142.1.2
2amxA/T0318-2amxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2amxA/T0318-2amxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7653e+011.01e-28

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001