Best Alignments for T0318

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zq1A/T0318-1zq1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zq1A/T0318-1zq1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8576e+008.37e-09
1jb9A/T0318-1jb9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jb9A/T0318-1jb9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3482e+002.14e-06 1fnc b.43.4.2
c.25.1.1
1yyaA/T0318-1yyaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yyaA/T0318-1yyaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1814e+001.44e-03
2bijA/T0318-2bijA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bijA/T0318-2bijA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8456e+001.45e-04
1aoxA/T0318-1aoxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aoxA/T0318-1aoxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1432e+011.55e-06 1aoxA c.62.1.1
2bv5A/T0318-2bv5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bv5A/T0318-2bv5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2477e+013.72e-05
1o5hA/T0318-1o5hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5hA/T0318-1o5hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3383e+016.99e-03 a.191.1.1
2b5oA/T0318-2b5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b5oA/T0318-2b5oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4770e+014.30e-03
1yb5A/T0318-1yb5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yb5A/T0318-1yb5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6689e+016.55e-04
1a8p/T0318-1a8p-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1a8p/T0318-1a8p-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8892e+013.30e-04 1fdr b.43.4.2
c.25.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001