Best Alignments for T0318

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1tx4B/T0318-1tx4B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tx4B/T0318-1tx4B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6833e+003.00e-03 1ctqA c.37.1.8
1tqyB/T0318-1tqyB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tqyB/T0318-1tqyB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2111e+001.25e-05 c.95.1.1
c.95.1.1
1b1cA/T0318-1b1cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b1cA/T0318-1b1cA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5268e+005.83e-05 1amoA c.23.5.2
1kmvA/T0318-1kmvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kmvA/T0318-1kmvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0439e+015.91e-05 c.71.1.1
1se0A/T0318-1se0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1se0A/T0318-1se0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0891e+012.52e-03 g.52.1.1
1ihp/T0318-1ihp-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihp/T0318-1ihp-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3440e+014.86e-07 1ihp c.60.1.2
1tc1A/T0318-1tc1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tc1A/T0318-1tc1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5700e+012.78e-04 1tc1A c.61.1.1
2b3yA/T0318-2b3yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b3yA/T0318-2b3yA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6831e+011.14e-01
1fa0A/T0318-1fa0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fa0A/T0318-1fa0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6835e+011.39e-07 1fa0B d.58.16.1
a.160.1.1
d.218.1.3
2b5lA/T0318-2b5lA-t04-local-adpstyle1.a2m 2b5lA/T0318-2b5lA-t04-local-adpstyle1.al 1.7802e+012.85e+00

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001