Best Alignments for T0317

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wrmA/T0317-1wrmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wrmA/T0317-1wrmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1429e-201.65e-87
1yz4A/T0317-1yz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yz4A/T0317-1yz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9754e-206.66e-86
1vhrA/T0317-1vhrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhrA/T0317-1vhrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1669e-196.40e-83 1vhrA c.45.1.1
1d5rA/T0317-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d5rA/T0317-1d5rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0238e-176.59e-57 1d5rA b.7.1.1
c.45.1.1
2b49A/T0317-2b49A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b49A/T0317-2b49A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5437e-161.30e-62
2fh7A/T0317-2fh7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fh7A/T0317-2fh7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.3898e-167.26e-52
1oheA/T0317-1oheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oheA/T0317-1oheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5219e-156.26e-57 c.45.1.1
c.45.1.1
2bzlA/T0317-2bzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bzlA/T0317-2bzlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8650e-151.70e-53
2f71A/T0317-2f71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f71A/T0317-2f71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.0349e-152.92e-52
1wchA/T0317-1wchA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wchA/T0317-1wchA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4116e-142.21e-51

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001