Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1703e-118.24e-38
1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2816e-113.50e-53 c.26.2.1
d.210.1.1
1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5185e-094.38e-29 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5378e-091.00e-36
1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2441e-071.61e-47 c.26.2.1
1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2327e-063.33e-41 c.26.2.5
d.229.1.1
2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6280e-061.13e-44
1ct9A/T0316-1ct9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ct9A/T0316-1ct9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8572e-041.57e-19 1ct9A c.26.2.1
d.153.1.1
1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0190e-031.50e-25
1rpnA/T0316-1rpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rpnA/T0316-1rpnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6166e-021.31e-23 c.2.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001