Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8057e-121.06e-37
1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0316-1vl2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1842e-111.67e-50 c.26.2.1
d.210.1.1
1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8568e-095.61e-41
1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4302e-092.23e-28 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ru8A/T0316-1ru8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1106e-073.96e-49 c.26.2.1
1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6082e-076.60e-38 c.26.2.5
d.229.1.1
2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6086e-072.40e-47
1ct9A/T0316-1ct9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ct9A/T0316-1ct9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3695e-057.25e-28 1ct9A c.26.2.1
d.153.1.1
1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0316-1wxiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1974e-036.88e-21
2c5sA/T0316-2c5sA-t2k-local-adpstyle1.a2m 2c5sA/T0316-2c5sA-t2k-local-adpstyle1.al 7.3141e-023.57e-09

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001