Best Alignments for T0316

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1korA/T0316-1korA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1korA/T0316-1korA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2505e-191.90e-75 c.26.2.1
d.210.1.1
1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0316-1wy5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0586e-184.96e-62
1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ni5A/T0316-1ni5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7096e-172.13e-54 c.26.2.5
d.229.1.1
1gpmA/T0316-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0316-1gpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3340e-152.63e-51 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0316-1xngA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2974e-142.84e-49
1ih8A/T0316-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ih8A/T0316-1ih8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1014e-124.24e-39 2nsyA c.26.2.1
2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0316-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3907e-124.94e-38
1ct9A/T0316-1ct9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ct9A/T0316-1ct9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7863e-104.07e-37 1ct9A c.26.2.1
d.153.1.1
1wxiA/T0316-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0316-1wxiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4879e-091.09e-35
2c5sA/T0316-2c5sA-t04-local-adpstyle1.a2m 2c5sA/T0316-2c5sA-t04-local-adpstyle1.al 5.7011e-083.18e-30

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001